Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911940.1_cds_XP_016461919.1_55195
CDS Infomation

[gene=LOC107785193] [db_xref=GeneID:107785193] [protein=malonate--CoA ligase-like] [protein_id=XP_016461919.1] [location=join(42061..42217,42972..43141,43371..43544,43820..44003,44105..44193,44829..44898,45036..45088,45192..45299,48376..48474,48653..48745,48851..48928,49085..49192,49275..49365,49973..50046,50181..50360,50715..50768,51085..51132)] [gbkey=CDS]
Sequence

ATGAGCTCATTTAAGTTACTCAACCACTTTCTCACCCTCAGGTCGTCTACACCTCTGTTT
TACTCTCCATTTCGATTCACTTTGTCTCTTCGATATTGTTTTTCTTCTCATAAAAACCCT
ATTTTTTGCTCCTCCCAATCTCGGTTATTCTCTTCCGCTTCAAATATTAGTAGCTATATG
GAGCTGGTGAAAGAAGTTGCCAGCAAGGGACCTGAGTCCCAGGAGAATATTGCAATACGA
GCTGATGAGAAGAGCTATACTTACCTTCAACTGATATCATCTGCAAGGAGGATATCAAAT
TTGTTAAGCAACCTAGATCTTAAAATTGGCAATGGCATAAAAAGAAATGTGGATCTTGAT
GGAGCAAGAGTAGGAATTGTAGCCAAACCCTGTGCTGAGTTTGTTGCTGGAATACTAGGG
ACTTGGCTACGTGGAGGTGTTGCAGTCCCTCTTGCGCTAAGCTACCCAGAAACCGAACTG
CTACATGTGATGAATGACTCGGACATCTCGGTAATTCTGAGTACTGAAGACCACCAAGAA
CTTATGAACACAATTGCAGTTAAAACTGGTGCCTGTTTATCTCTTATTCCTCCTATTCCC
GATGGCGATTTATCGACCAAGCATGACCCTCCAAAAGATGTGGTGTCTGATGGTCCTAGA
AATTTGCCAGAAATGACAAACTGTGGTGAGGATCCAGCTATGATCTTGTACACCAGTGGT
ACAACAGGGAAACCAAAAGGAGTAGTCCATACACACAAAGGAATTTTAGCTCAGATTCAA
ATTTTAGCAGAGGCATGGGAGTACACGTCCAAGGACCAATTTCTGCACTGTTTGCCACTT
CATCATGTGCATGGGCTCTTCAATGCATTACTTGCCCCTCTTTATGCTAGTTCCACGGTC
GACTTTATGCCAAAATTCAGTGTGAGGGGGATTTGGCAGAAATGGCGTGAATCTTATCCT
ACAGATGGGACTAAAACTGATAATGCTATAACAGTGTTCACTGGAGTTCCTACTATGTAT
ACACGATTAATACAAGGTTATGAAGCGATGGAGCCAGAACTGAAAGCAGCCTCTGCTTCA
GCAGCAAGGCACTTGCGTCTTATGATGTGTGGCTCCTCTGCACTTCCTTTGCCCGTCATG
CAGCAATGGGAAACAATTACAGGTCATCGGCTATTAGAACGTTATGGCATGACAGAGTTT
GTGATGGCAATATCTAATCCAATTAAAGGCAAACGCAAAGGAGGTACTGTTGGCAAGCCA
TTTTCAGGTGTTCAGGCCAAGATCCTTTTGGATGATGAGAGTGGTAGTGATAAAACAGGA
GTAGGGGAGCTTTGCATTAAGAGCCCTTCATTGTTCAAAGAATATTGGAGNCGAGGCAAA
AAAGTAACCAAGCAATCATTTACTGATGATGGGTTCTTCAAGACTGGAGATGCTGTTACA
GTGGATGAAGAAGGATATTACATCATTTTGGGACGGACCAATGCTGATATTATGAAGGTC
GGTGGATACAAGTTATCAGCATTGGAAATTGAAGCAGTACTATTGGAGCATCCAACTATA
TCAGAATGCTGTGTATTAGGATTACCTGACAAAGACTATGGTGAAGTGGTGTGTGCAATT
GTTGTTCCTGACGCCGAGCTCAAAAGAAAGCAAGATGAGGAATTAAAACCTGCACTAAGC
TTGCAAGAACTTTCAGATTGGGCAAAAGAGAGACTTGCCCCTTATAAGATACCTAATCAT
CTGTACGTGTGGGACTCACTGCCTCGCAATGCTATGGGGAAGGTAAACAAAAAGGAGCTG
AAGAGAAAGCTGGCTGATGATCCGAAATGA

Peptide Sequence

PEP ID

XP_016461919.1
PEP Infomation

PREDICTED: malonate--CoA ligase-like [Nicotiana tabacum]
Sequence

MSSFKLLNHFLTLRSSTPLFYSPFRFTLSLRYCFSSHKNPIFCSSQSRLFSSASNISSYM
ELVKEVASKGPESQENIAIRADEKSYTYLQLISSARRISNLLSNLDLKIGNGIKRNVDLD
GARVGIVAKPCAEFVAGILGTWLRGGVAVPLALSYPETELLHVMNDSDISVILSTEDHQE
LMNTIAVKTGACLSLIPPIPDGDLSTKHDPPKDVVSDGPRNLPEMTNCGEDPAMILYTSG
TTGKPKGVVHTHKGILAQIQILAEAWEYTSKDQFLHCLPLHHVHGLFNALLAPLYASSTV
DFMPKFSVRGIWQKWRESYPTDGTKTDNAITVFTGVPTMYTRLIQGYEAMEPELKAASAS
AARHLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPIKGKRKGGTVGKP
FSGVQAKILLDDESGSDKTGVGELCIKSPSLFKEYWXRGKKVTKQSFTDDGFFKTGDAVT
VDEEGYYIILGRTNADIMKVGGYKLSALEIEAVLLEHPTISECCVLGLPDKDYGEVVCAI
VVPDAELKRKQDEELKPALSLQELSDWAKERLAPYKIPNHLYVWDSLPRNAMGKVNKKEL
KRKLADDPK

Transcript Sequence

Gene sequence data has not been registered.